Associate Engineer / Senior Associate Engineer, Systems Design & Integration
Summary
Spear Bio, a biotech startup in Woburn, MA, seeks a hands-on engineer to build data analysis software, instrument control tools, dashboards, and LIMS infrastructure for its ultrasensitive SPEAR immunoassay platform, while also running bench-level assays to generate baseline data. Core skills: Python, Git/CI-CD, and regulated (21 CFR Part 11, ISO 13485) software development.
Spear Bio, founded in 2021, is a well-funded and rapidly growing biotech start-up headquartered in Woburn, Massachusetts. Our proprietary technology, Successive Proximity Extension Amplification Reaction (SPEAR), is a novel wash-free immunoassay platform, offering unprecedented sensitivity. We are dedicated to revolutionizing early disease diagnosis and monitoring by providing scalable, ultrasensitive solutions that deliver unparalleled accuracy in measuring low-abundant biomarkers, enabling clinicians and researchers to improve patient outcomes and advance global health.
Associate Engineer / Senior Associate Engineer, Systems Design & Integration
Spear Bio is seeking a hands-on and motivated Associate Engineer / Senior Associate Engineer, Systems Design & Integration to support the development and integration of software tools, data analysis platforms, and automated assay workflows within our next-generation ultrasensitive immunoassay platform. This role sits at the intersection of software development, data engineering, and bench-level assay execution—you will build and refine the data analysis and instrument control software that enables our platform, while maintaining enough hands-on assay familiarity to generate baseline data and understand the biological inputs that drive your software.
You will work closely with cross-functional teams helping to assemble, test, and refine complex systems. This is an exciting opportunity to gain broad, system-level experience while contributing to the advancement of a transformative life sciences platform.
Key Responsibilities:
Software Development & Data Analysis Tools
• Develop and maintain data analysis software and tools for the SPEAR platform, including assay data processing pipelines, calibration curve fitting, and results reporting.
• Contribute to the development and maintenance of Spear Bio’s LIMS (Laboratory Information Management System) infrastructure, ensuring data integrity, traceability, and regulatory compliance.
• Build and improve dashboards, visualization tools, and automated reporting for assay performance metrics and system quality tracking.
• Support instrument control software development and integration, working with firmware and application-layer interfaces to ensure reliable automated workflows.
• Leverage AI-assisted development tools (e.g., GitHub Copilot, Claude, ChatGPT) to accelerate software development, code review, and test automation—and proactively identify new opportunities to apply AI tools to engineering workflows.
• Ensure all software development follows 21 CFR Part 11 compliance principles, including audit trails, electronic signatures, data integrity, and access controls where applicable.
System Integration & Verification
• Assist with the integration of hardware, software, and reagent components into a cohesive immunoassay platform, ensuring functional alignment across subsystems.
• Collaborate with internal teams and external partners to troubleshoot technical issues related to subsystems, consumables, and instrumentation (e.g., liquid handlers, sensors, and robotics).
• Execute system integration and verification test protocols; document results and support the development of technical reports and design documentation.
• Identify and address system-level issues; contribute to continuous improvement initiatives for workflow robustness and operational efficiency.
Assay Execution & Baseline Data Generation
• Perform baseline assay runs on the SPEAR platform to generate reference data for software validation, calibration development, and performance benchmarking.
• Develop a working understanding of SPEAR assay workflows (sample preparation, plate setup, qPCR readout, SPEARview data analysis) sufficient to independently execute standard protocols and interpret assay results.
• Translate bench-level assay insights into software requirements—ensuring that data analysis tools accurately reflect the biology they are designed to process.
Documentation & Compliance
• Maintain organized records of system configurations, integration workflows, software versions, and experimental outcomes.
• Support calibration, maintenance, and review of system performance for development and pilot-scale platforms.
• Contribute to root cause investigations and system refinements to enhance usability, scalability, and reliability.
• Ensure documentation practices align with ISO 13485 and FDA QSR design control expectations where applicable.
Qualifications:
Education & Experience
• Bachelor’s or Master’s degree in Bioengineering, Biomedical Engineering, Computer Science, Bioinformatics, or a related discipline.
• 1–4 years of experience with lab systems integration, software development for scientific instruments, or diagnostics platform development.
Technical Skills
• Proficiency in Python for data analysis, scripting, and application development. Experience with additional languages (C#, JavaScript, SQL) is a plus.
• Experience building or contributing to data analysis pipelines, LIMS systems, or scientific software applications in a regulated environment.
• Familiarity with 21 CFR Part 11 compliance requirements and software development under design controls (ISO 13485, FDA QSR). Direct experience is preferred; foundational understanding is required.
• Hands-on experience or strong willingness to learn assay execution for plate-based immunoassays, qPCR workflows, or similar biological assays.
• Experience with or enthusiasm for AI-assisted development tools and their application to engineering and data analysis workflows.
• Prior experience using liquid handling systems (e.g., Hamilton, Tecan, Formulatrix) is a plus.
• Working knowledge of CAD tools (e.g., SolidWorks) and familiarity with diagnostic laboratory instruments and life science automation systems.
• Familiarity with version control (Git), CI/CD concepts, and collaborative development practices.
Soft Skills
• Detail-oriented, with strong organizational and documentation skills.
• Effective communicator and team player, able to collaborate in a fast-paced, interdisciplinary environment.
• Self-motivated learner comfortable bridging software engineering and wet-lab biology.
• Comfortable working in a startup environment where scope evolves rapidly and initiative is valued.
We offer competitive compensation, meaningful stock ownership, comprehensive benefits, and a great work environment. This is an opportunity to enter an innovative, high-growth startup at an early stage and play an integral role in the company's growth and success. We are focused on identifying candidates who have demonstrated leadership and excellence throughout their careers and are excited by the prospect of building an industry-leading company.
Spear Bio Inc. provides equal opportunity in employment to all persons. No person shall be denied equal access because of race, creed, color, religion, national origin, sex, sexual orientation, gender identity, age, or physical/mental disability.
Spear Bio does not accept resume submissions from external recruiting agencies. Any unsolicited resumes or candidate information submitted without prior written agreement will be deemed the property of Spear Bio, and no placement fees will be paid.
Skills
As published by ashby · 24 questions · 10 written answers
Basics
Name, Email, Location, Resume
Short answers (6)
- Phone Number
- Address
- Date Available To Start
- Desired Salary
- Website, Portfolio, or Link to Publications optional
- LinkedIn Profile
Pick from a list (8)
- Are you legally authorized to work in the US?
- Do you now, or will you in the future require visa sponsorship to work in the United States?
- Are you based local to Woburn, MA, or would you need to relocate for this position?
- Are you able to work onsite 5 days /week in our Woburn, MA office?
- How many years of experience do you have working at the intersection of biological assay systems and engineering/automation platforms (integration, validation, troubleshooting, or applied R&D)?
- Which programming languages do you use for automation, data analysis, or workflow development? (Select all that apply)
- Do you have experience with any of the following regulated software or data systems? (Select all that apply)
- Have you personally executed plate-based biological assays (immunoassays, qPCR, ELISA, or similar)at the bench?
Written answers (10)
- If you answered yes to the above question, please explain your current immigration status and what your visa or immigration sponsorship needs are optional
- Describe a software tool, data pipeline, or analysis application you built or significantly contributed to in a scientific or engineering context. What was the problem, what did you build, and what was the impact?
- This role requires you to both write software and periodically run assays at the bench. How do you see yourself balancing these two modes of work?
- Have you used AI-assisted tools in your engineering or software development work? Describe how you’ve applied them and what you’ve learned about their strengths and limitations.
- Tell us about a time you had to ensure data integrity or regulatory compliance in a software or data system. What was the requirement, and how did you implement it?
- Describe a project where you integrated biological assay workflows with engineering systems. What was the system, what challenges arose at the biology-engineering interface, and how did you resolve them?
- Tell us about a time you had to determine whether a performance failure originated from assay chemistry, workflow automation, or an engineering subsystem. How did you isolate the root cause?
- Describe a workflow, test framework, or data pipeline you developed or automated. What problem did it solve, what tools did you use, and how did it improve the team’s capability?
- This role has a clear growth trajectory toward SME and lead systems engineer within 2–3 years. How does this align with your career goals, and what in your background prepares you for that trajectory?
- What draws you to a broad systems integration role at an early-stage biotech? What trade-offs are you willing to make compared to a more narrowly scoped role at a larger organization?